BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F04LP1|AL426066
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1677 1653 0.0
>3x_Contig1677
Length = 15081
Score = 1653 bits (832), Expect = 0.0
Identities = 856/862 (99%), Gaps = 3/862 (0%)
Strand = Plus / Plus
Query: 1 gggaacagtcttgtgagttcgagaggaacgatgaatggtgtgttgacggtasg-aaaatc 59
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 8634 gggaacagtcttgtgagttcgagaggaacgatgaatggtgtgttgacggtacggaaaatc 8693
Query: 60 gagacgcatcaattgcgctgtggggattgagatgaactctgcttcggtggaaggattttt 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8694 gagacgcatcaattgcg-tgtggggattgagatgaactctgcttcggtggaaggattttt 8752
Query: 120 ggtactctgggataagcaaggttctcagatagtcgtgatttctccgtttggagacgtttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8753 ggtactctgggataagcaaggttctcagatagtcgtgatttctccgtttggagacgtttc 8812
Query: 180 agtgtataatgttgacgggggcatatcaccgcgtaacgagctagttagagtggcacggat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8813 agtgtataatgttgacgggggcatatcaccgcgtaacgagctagttagagtggcacggat 8872
Query: 240 ttcatggaacgagtttttgttcatgggccattcagatgcagtttattttgggaacgctca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8873 ttcatggaacgagtttttgttcatgggccattcagatgcagtttattttgggaacgctca 8932
Query: 300 cgacggtggtgttcgtcatgattactgggatgtgggtgccattagtacgatgtggcatat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8933 cgacggtggtgttcgtcatgattactgggatgtgggtgccattagtacgatgtggcatat 8992
Query: 360 acctaaggatgacaccttctgttgcgtgctaccagacggtattgcacatgtcactgagaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8993 acctaaggatgacaccttctgttgcgtgctaccagacggtattgcacatgtcactgagaa 9052
Query: 420 tccaagaagaacgttacggagacggacttctttggatgacgagaatttggaatcaagaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9053 tccaagaagaacgttacggagacggacttctttggatgacgagaatttggaatcaagaca 9112
Query: 480 aatgacgcattacatacaagattactcgatcatcgagccatgccctgctaaggatgctct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9113 aatgacgcattacatacaagattactcgatcatcgagccatgccctgctaaggatgctct 9172
Query: 540 agcgatagctaagaggaccggagagattgccattctagtggacggttcgttacggttcgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9173 agcgatagctaagaggaccggagagattgccattctagtggacggttcgttacggttcgt 9232
Query: 600 caccgggatgggtctcaccgacgaagaggggaacaataacggtaatagcacacagagaac 659
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9233 caccgggatgggtctcaccgacgaagaggggaacaataacggtaatagca-acagagaac 9291
Query: 660 aatggaatcccaacgatagggtaatgaagatgtyatggtcccacgacggtaggttccttt 719
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9292 aatggaatcccaacgatagggtaatgaagatgtcatggtcccacgacggtaggttccttt 9351
Query: 720 gtatcgtcaccacgcaacggattttcgtgtatgacgaagaagaagatgctctcaccgtcg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9352 gtatcgtcaccacgcaacggattttcgtgtatgacgaagaagaagatgctctcaccgtcg 9411
Query: 780 tggcaggagagaatccaaaccaactcatatcttggggtagcagctgccgtacgttgttcc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9412 tggcaggagagaatccaaaccaactcatatcttggggtagcagctgccgtacgttgttcc 9471
Query: 840 tgctatctacacacttgtwcgg 861
|||||||||||||||||| |||
Sbjct: 9472 tgctatctacacacttgtacgg 9493
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4673
Number of Sequences: 1807
Number of extensions: 4673
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)